Assembly-free single-molecule nanopore sequencing recovers complete virus genomes from natural microbial communities
John Beaulaurier, Elaine Luo, John Eppley, Paul Den Uyl, Xiaoguang Dai, Daniel J Turner, Matthew Pendelton, et al.. doi: https://doi.org/10.1101/619684. Posted in BioRxiv on Apr. 26, 2019..
COMMENT: The main objective was to develop a method to recover viral genome sequences from metagenomics samples making use of long reads. + info
Nicholas A. Bokulich, Juan Maldonado, Dae-Wook Kang, Rosa Krajmalnik-Brown and J. Gregory Caporaso.
doi: http://dx.doi.org/10.1101/524512. Posted in BioRxiv on Jan. 18, 2019.
COMMENT: Under certain... + info
Durrant MG, Li MM, Siranosian B, Bhatt AS doi: http://dx.doi.org/10.1101/527788. Posted in BioRxiv on Jan. 23, 2019.
COMMENT: This work describes a new... + info
HLA alleles associated with risk of ankylosing spondylitis and rheumatoid arthritis influence the gut microbiome
Mark Asquith et al. doi: https://doi.org/10.1101/517813. Posted in BioRxiv on January 16, 2019.
COMMENT: The main objective of the study is to find out if the discrete gut microbiome features found in patients with ankylosing spondylitis (AS) and rheumatoid arthritis (RA) are a cause or a consequence of having HLA risk alleles. To prove... + info
Authors: Awad Mahalhal, Jonathan M. Williams, Sophie Johnson, Nicholas Ellaby, Carrie A. Duckworth, Michael D. Burkitt, Xuan Liu, Georgina L. Hold, Barry J. Campbell, D. Mark Pritchard, Chris S. Probert
bioRxiv... + info
Authors: Anastasia A Chernyatina and Harry H Low. bioRxiv preprint first posted online Aug. 22, 2018.
COMMENT: In this Preprint the authors, using a fusion of negative stain and cryo-electron... + info
Authors: Steven L. Salzberg, Florian P. Breitwieser, Anupama Kumar, Haiping Hao, Peter Burger, Fausto J. Rodriguez, Michael Lim, Alfredo Quiñones-Hinojosa, Gary L. Gallia, Jeffrey A Tornheim, Michael T. Melia, Cynthia L. Sears and Carlos A. Pardo. Preprint posted in bioRxiv online Feb. 9, 2016.
COMMENT: In this work NGS is used for differential diagnosis of nervous system pathologies whose diagnosis with conventional methods is problematic. + info
Authors: Serghei Mangul, Loes M Olde Loohuis, Anil P Ori, Guillaume Jospin, David Koslicki, Harry Taegyun Yang, Timothy Wu, Marco P Boks, Catherine Lomen-Hoerth, Martina Wiedau-Pazos, Rita M Cantor, Willem M de Vos,René S Kahn, Eleazar Eskin, Roel A Ophoff. Preprint posted in BioRxiv on June 7, 2016.
COMMENT: In this preprint the authors demostrate the potential use of total RNA to study microbes that inhabit the blood. + info